Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TSSC4Q9Y5U2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 BX276092.7-203ENST00000637198 1536 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 MST1L-201ENST00000442552 2185 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 MED15P5-201ENST00000423150 992 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AC092865.5-201ENST00000545435 363 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AC012640.2-201ENST00000561606 901 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AC005593.1-201ENST00000624894 515 ntBASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TSSC4Q9Y5U2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
TSSC4Q9Y5U2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TSSC4Q9Y5U2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 SIRPAP1-201ENST00000448467 1770 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AL353593.2-201ENST00000602529 1483 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC003669.1-201ENST00000334569 611 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 KLF4P1-201ENST00000412782 1185 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 DDX43P3-201ENST00000441064 443 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 RNA5SP415-201ENST00000517246 115 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.64□□□□□ -0.23
TSSC4Q9Y5U2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms