Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 AC097637.2-201ENST00000624096 1997 ntBASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 ACTG1P4-201ENST00000425123 1122 ntBASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 AL139288.1-201ENST00000623748 933 ntBASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 PCDHA12-202ENST00000613593 2588 ntBASIC19.31■□□□□ 0.68
BLOC1S4Q9NUP1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 LINC00982-205ENST00000420957 435 ntBASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 EMBP1-201ENST00000458200 901 ntBASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 AC064862.7-201ENST00000604520 867 ntBASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 AL022326.1-202ENST00000641533 845 ntBASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.3■□□□□ 0.68
BLOC1S4Q9NUP1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms