Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 RPSAP43-201ENST00000402237 625 ntBASIC18.74■□□□□ 0.59
NXF3Q9H4D5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.74■□□□□ 0.59
NXF3Q9H4D5 AC092865.6-201ENST00000642101 219 ntBASIC18.74■□□□□ 0.59
NXF3Q9H4D5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NXF3Q9H4D5 AC018470.1-201ENST00000624790 3129 ntBASIC18.74■□□□□ 0.59
NXF3Q9H4D5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 GGTLC5P-201ENST00000617623 998 ntBASIC18.73■□□□□ 0.59
NXF3Q9H4D5 AC055717.3-201ENST00000622967 595 ntBASIC18.73■□□□□ 0.59
NXF3Q9H4D5 AC010507.1-201ENST00000633895 436 ntBASIC18.73■□□□□ 0.59
NXF3Q9H4D5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NXF3Q9H4D5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 AL513190.1-201ENST00000621254 727 ntBASIC18.72■□□□□ 0.59
NXF3Q9H4D5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NXF3Q9H4D5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 AC112482.1-201ENST00000492080 688 ntBASIC18.71■□□□□ 0.59
NXF3Q9H4D5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms