Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NDUFAF3Q9BU61 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFAF3Q9BU61 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 TSPY14P-201ENST00000303979 915 ntBASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 AL122018.1-201ENST00000446607 2310 ntBASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFAF3Q9BU61 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 KRT8P11-201ENST00000409686 1436 ntBASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TERF1P1-201ENST00000311003 1181 ntBASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 MFAP1P1-201ENST00000442257 1255 ntBASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 AC116562.4-202ENST00000641738 218 ntBASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 CICP14-201ENST00000629111 2732 ntBASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NDUFAF3Q9BU61 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFAF3Q9BU61 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms