Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 AL009183.1-201ENST00000603760 355 ntBASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM43Q96BQ3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 ARSEP1-201ENST00000420443 635 ntBASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 MIR4453-201ENST00000584019 89 ntBASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM43Q96BQ3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ATP5G2P4-201ENST00000442175 420 ntBASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 AC009118.2-201ENST00000613275 655 ntBASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM43Q96BQ3 AL020996.1-203ENST00000536896 2307 ntBASIC18.71■□□□□ 0.58
TRIM43Q96BQ3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM43Q96BQ3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM43Q96BQ3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms