Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 NSUN5P1-202ENST00000421140 1535 ntBASIC15.39■□□□□ 0.05
RTTNQ86VV8 NSUN5P2-203ENST00000457352 1529 ntBASIC15.39■□□□□ 0.05
RTTNQ86VV8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 NUS1P1-201ENST00000446295 882 ntBASIC15.39■□□□□ 0.05
RTTNQ86VV8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.39■□□□□ 0.05
RTTNQ86VV8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 TERC-201ENST00000602385 541 ntBASIC15.39■□□□□ 0.05
RTTNQ86VV8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.39■□□□□ 0.05
RTTNQ86VV8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTTNQ86VV8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.38■□□□□ 0.05
RTTNQ86VV8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 AC008894.3-201ENST00000624324 3103 ntBASIC15.38■□□□□ 0.05
RTTNQ86VV8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 AC104819.1-201ENST00000504587 486 ntBASIC15.38■□□□□ 0.05
RTTNQ86VV8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTTNQ86VV8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.38■□□□□ 0.05
RTTNQ86VV8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 DDX43P3-201ENST00000441064 443 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 KRT16P4-201ENST00000453883 522 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 RNA5SP419-201ENST00000515908 135 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 AL121912.1-201ENST00000603683 238 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 IL9RP2-201ENST00000423948 1312 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms