Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 ALG1L8P-201ENST00000533887 760 ntBASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KRT28Q7Z3Y7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC23.33■■□□□ 1.32
KRT28Q7Z3Y7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
KRT28Q7Z3Y7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KRT28Q7Z3Y7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 OR8S1-201ENST00000310194 1080 ntBASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 MRPS18AP1-201ENST00000414458 589 ntBASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 AC004890.2-204ENST00000481968 304 ntBASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 AC025048.6-201ENST00000634326 1161 ntBASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KRT28Q7Z3Y7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 SPDYE22P-201ENST00000582158 798 ntBASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 AL139327.4-201ENST00000612362 153 ntBASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
KRT28Q7Z3Y7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 AL596325.1-201ENST00000563991 1082 ntBASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 AL662799.1-202ENST00000614205 422 ntBASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 AL358472.5-202ENST00000641448 1267 ntBASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
KRT28Q7Z3Y7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 AC012569.1-201ENST00000591191 1524 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 WIZP1-201ENST00000531444 2299 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 CD81-202ENST00000381036 880 ntTSL 3 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 NME2P1-201ENST00000426182 414 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 AC005412.3-201ENST00000580309 715 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 AC027307.3-201ENST00000594262 1100 ntBASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT28Q7Z3Y7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 AC241585.1-201ENST00000433527 519 ntBASIC23.28■■□□□ 1.32
KRT28Q7Z3Y7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms