Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CTR9Q6PD62 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.65■□□□□ 0.9
CTR9Q6PD62 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.65■□□□□ 0.9
CTR9Q6PD62 AL353135.1-201ENST00000606729 504 ntBASIC20.65■□□□□ 0.9
CTR9Q6PD62 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTR9Q6PD62 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTR9Q6PD62 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.65■□□□□ 0.9
CTR9Q6PD62 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.64■□□□□ 0.9
CTR9Q6PD62 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.64■□□□□ 0.9
CTR9Q6PD62 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.64■□□□□ 0.9
CTR9Q6PD62 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CTR9Q6PD62 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTR9Q6PD62 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTR9Q6PD62 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.64■□□□□ 0.89
CTR9Q6PD62 AC068880.1-201ENST00000507289 2297 ntBASIC20.64■□□□□ 0.89
CTR9Q6PD62 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 AC009947.1-201ENST00000444350 727 ntBASIC20.63■□□□□ 0.89
CTR9Q6PD62 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 Z83851.2-201ENST00000609564 659 ntBASIC20.63■□□□□ 0.89
CTR9Q6PD62 MIR1199-201ENST00000621445 119 ntBASIC20.63■□□□□ 0.89
CTR9Q6PD62 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.63■□□□□ 0.89
CTR9Q6PD62 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTR9Q6PD62 AL133373.2-201ENST00000623187 2828 ntBASIC20.63■□□□□ 0.89
CTR9Q6PD62 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 ZNF259P1-201ENST00000407656 1365 ntBASIC20.62■□□□□ 0.89
CTR9Q6PD62 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 ACTG1P4-201ENST00000425123 1122 ntBASIC20.62■□□□□ 0.89
CTR9Q6PD62 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 AC005593.1-201ENST00000624894 515 ntBASIC20.62■□□□□ 0.89
CTR9Q6PD62 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 AC067852.2-201ENST00000590513 2313 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms