Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 AC063952.2-201ENST00000498792 1227 ntBASIC17.8■□□□□ 0.44
CASC4Q6P4E1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC096633.1-201ENST00000422446 749 ntBASIC17.79■□□□□ 0.44
CASC4Q6P4E1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AL671277.2-201ENST00000458060 996 ntBASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC022616.7-201ENST00000525383 220 ntBASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 LINC01238-205ENST00000567549 1107 ntBASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 AC083849.1-201ENST00000615227 514 ntBASIC17.79■□□□□ 0.44
CASC4Q6P4E1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASC4Q6P4E1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AL645929.1-201ENST00000420084 975 ntBASIC17.78■□□□□ 0.44
CASC4Q6P4E1 GUSBP12-201ENST00000513727 720 ntBASIC17.78■□□□□ 0.44
CASC4Q6P4E1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AC016396.2-201ENST00000562575 1417 ntBASIC17.78■□□□□ 0.44
CASC4Q6P4E1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASC4Q6P4E1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASC4Q6P4E1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms