Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AC125634.1-201ENST00000438758 1403 ntBASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 VENTXP7-201ENST00000475503 772 ntBASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 BNIP3P18-201ENST00000593976 575 ntBASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AC022898.2-201ENST00000616822 1312 ntBASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KHDC1Q4VXA5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 AC099336.1-202ENST00000602961 463 ntBASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 KRT18P55-202ENST00000578578 1546 ntBASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KHDC1Q4VXA5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
KHDC1Q4VXA5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 AC009949.1-201ENST00000623048 1830 ntBASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 FOSL1P1-201ENST00000511041 816 ntBASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 AC138894.3-201ENST00000603787 634 ntBASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KHDC1Q4VXA5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms