Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC1P51610 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HCFC1P51610 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 AL627223.1-201ENST00000416693 442 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC1P51610 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 AC093214.1-201ENST00000511688 1107 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.1■□□□□ 0.01
HCFC1P51610 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC1P51610 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HCFC1P51610 Z92544.3-201ENST00000624747 417 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 AC105339.1-204ENST00000636249 355 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 NOC2LP2-201ENST00000407594 1944 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC1P51610 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC1P51610 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC1P51610 CXCL1P1-201ENST00000502804 216 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.1■□□□□ 0.01
HCFC1P51610 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC1P51610 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.1■□□□□ 0.01
HCFC1P51610 AC116407.2-201ENST00000613639 860 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 AC092919.2-201ENST00000623631 1645 ntBASIC15.1■□□□□ 0.01
HCFC1P51610 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC1P51610 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC1P51610 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HCFC1P51610 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HCFC1P51610 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.09■□□□□ 0.01
HCFC1P51610 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 BCRP1-201ENST00000444246 691 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.09■□□□□ 0.01
HCFC1P51610 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HCFC1P51610 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 REXO1L11P-201ENST00000620964 1927 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.09■□□□□ 0.01
HCFC1P51610 AC129492.6-201ENST00000611383 1305 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.09■□□□□ 0.01
HCFC1P51610 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 PTCHD3P3-201ENST00000403073 906 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCFC1P51610 AC138761.1-201ENST00000584393 385 ntBASIC15.09■□□□□ 0.01
HCFC1P51610 AP001059.3-201ENST00000619053 235 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms