Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.81■□□□□ 0.28
RAB28P51157 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 AC148477.8-201ENST00000624298 468 ntBASIC16.81■□□□□ 0.28
RAB28P51157 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB28P51157 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB28P51157 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB28P51157 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB28P51157 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 AL031284.1-201ENST00000419297 478 ntBASIC16.8■□□□□ 0.28
RAB28P51157 ACTG1P4-201ENST00000425123 1122 ntBASIC16.8■□□□□ 0.28
RAB28P51157 HNRNPDP1-201ENST00000439535 754 ntBASIC16.8■□□□□ 0.28
RAB28P51157 FDX1P1-201ENST00000449115 551 ntBASIC16.8■□□□□ 0.28
RAB28P51157 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAB28P51157 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB28P51157 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.8■□□□□ 0.28
RAB28P51157 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB28P51157 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB28P51157 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB28P51157 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB28P51157 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB28P51157 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB28P51157 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB28P51157 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 AP001005.1-201ENST00000571755 1248 ntBASIC16.79■□□□□ 0.28
RAB28P51157 AC006557.2-201ENST00000592985 1240 ntBASIC16.79■□□□□ 0.28
RAB28P51157 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB28P51157 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
RAB28P51157 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB28P51157 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB28P51157 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB28P51157 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB28P51157 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB28P51157 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB28P51157 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RAB28P51157 PCDHB18P-201ENST00000524813 2368 ntBASIC16.78■□□□□ 0.28
RAB28P51157 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RAB28P51157 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB28P51157 LINC00982-205ENST00000420957 435 ntBASIC16.78■□□□□ 0.28
RAB28P51157 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms