Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CR1P49238 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CR1P49238 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CR1P49238 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CX3CR1P49238 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CX3CR1P49238 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CR1P49238 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CR1P49238 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.33■□□□□ 0.04
CX3CR1P49238 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CR1P49238 AC007967.3-201ENST00000434308 558 ntBASIC15.33■□□□□ 0.04
CX3CR1P49238 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CX3CR1P49238 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CR1P49238 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 RN7SL606P-201ENST00000472779 293 ntBASIC15.33■□□□□ 0.04
CX3CR1P49238 KRT18P21-201ENST00000515767 1272 ntBASIC15.33■□□□□ 0.04
CX3CR1P49238 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CX3CR1P49238 AL136038.3-201ENST00000561909 1096 ntBASIC15.33■□□□□ 0.04
CX3CR1P49238 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CR1P49238 AC090616.6-201ENST00000582640 721 ntBASIC15.33■□□□□ 0.04
CX3CR1P49238 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CR1P49238 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CX3CR1P49238 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
CX3CR1P49238 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CR1P49238 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 AC011840.4-201ENST00000578471 627 ntBASIC15.32■□□□□ 0.04
CX3CR1P49238 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CX3CR1P49238 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.32■□□□□ 0.04
CX3CR1P49238 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CR1P49238 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CR1P49238 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CR1P49238 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CX3CR1P49238 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.31■□□□□ 0.04
CX3CR1P49238 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.31■□□□□ 0.04
CX3CR1P49238 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CX3CR1P49238 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CX3CR1P49238 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.31■□□□□ 0.04
CX3CR1P49238 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CX3CR1P49238 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.31■□□□□ 0.04
CX3CR1P49238 IGHV3-52-201ENST00000519770 353 ntBASIC15.31■□□□□ 0.04
CX3CR1P49238 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CX3CR1P49238 KRT8P26-201ENST00000534154 1276 ntBASIC15.31■□□□□ 0.04
CX3CR1P49238 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.31■□□□□ 0.04
CX3CR1P49238 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.31■□□□□ 0.04
CX3CR1P49238 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.31■□□□□ 0.04
CX3CR1P49238 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.31■□□□□ 0.04
CX3CR1P49238 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms