Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
VARSP26640 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VARSP26640 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
VARSP26640 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VARSP26640 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VARSP26640 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.16■□□□□ 0.34
VARSP26640 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.16■□□□□ 0.34
VARSP26640 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VARSP26640 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARSP26640 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
VARSP26640 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 NKILA-202ENST00000614771 2598 ntBASIC17.15■□□□□ 0.34
VARSP26640 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 AL845331.1-201ENST00000424978 1190 ntBASIC17.15■□□□□ 0.34
VARSP26640 AC246785.2-201ENST00000432512 513 ntBASIC17.15■□□□□ 0.34
VARSP26640 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 AL121772.3-201ENST00000610840 674 ntBASIC17.15■□□□□ 0.34
VARSP26640 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARSP26640 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.15■□□□□ 0.34
VARSP26640 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
VARSP26640 AC016734.2-201ENST00000624325 1377 ntBASIC17.15■□□□□ 0.34
VARSP26640 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VARSP26640 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.14■□□□□ 0.33
VARSP26640 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 AC090616.6-201ENST00000582640 721 ntBASIC17.14■□□□□ 0.33
VARSP26640 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 AL589935.2-201ENST00000616471 1231 ntBASIC17.14■□□□□ 0.33
VARSP26640 AC011676.5-201ENST00000624864 2660 ntBASIC17.14■□□□□ 0.33
VARSP26640 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.14■□□□□ 0.33
VARSP26640 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
VARSP26640 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARSP26640 REXO1L11P-201ENST00000620964 1927 ntBASIC17.13■□□□□ 0.33
VARSP26640 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.13■□□□□ 0.33
VARSP26640 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms