Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC114341.1-201ENST00000618070 349 ntBASIC17.26■□□□□ 0.35
NELFEP18615 REXO1L6P-202ENST00000619970 1078 ntBASIC17.26■□□□□ 0.35
NELFEP18615 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
NELFEP18615 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NELFEP18615 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.26■□□□□ 0.35
NELFEP18615 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 SAPCD2P3-201ENST00000455031 850 ntBASIC17.25■□□□□ 0.35
NELFEP18615 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.25■□□□□ 0.35
NELFEP18615 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.25■□□□□ 0.35
NELFEP18615 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.25■□□□□ 0.35
NELFEP18615 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.25■□□□□ 0.35
NELFEP18615 AL121912.1-201ENST00000603683 238 ntBASIC17.25■□□□□ 0.35
NELFEP18615 AL591684.3-201ENST00000605187 298 ntBASIC17.25■□□□□ 0.35
NELFEP18615 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.25■□□□□ 0.35
NELFEP18615 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.25■□□□□ 0.35
NELFEP18615 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
NELFEP18615 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NELFEP18615 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NELFEP18615 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 AKR1C7P-201ENST00000305623 895 ntBASIC17.24■□□□□ 0.35
NELFEP18615 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NELFEP18615 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NELFEP18615 AC009078.2-202ENST00000463353 338 ntBASIC17.24■□□□□ 0.35
NELFEP18615 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.24■□□□□ 0.35
NELFEP18615 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NELFEP18615 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.24■□□□□ 0.35
NELFEP18615 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NELFEP18615 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.24■□□□□ 0.35
NELFEP18615 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.24■□□□□ 0.35
NELFEP18615 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
NELFEP18615 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NELFEP18615 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFEP18615 PCDH8P1-201ENST00000428983 2773 ntBASIC17.23■□□□□ 0.35
NELFEP18615 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms