Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.42■□□□□ 0.22
SNX4O95219 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.42■□□□□ 0.22
SNX4O95219 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.42■□□□□ 0.22
SNX4O95219 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.42■□□□□ 0.22
SNX4O95219 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNX4O95219 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
SNX4O95219 AL162727.3-201ENST00000635661 2787 ntBASIC16.42■□□□□ 0.22
SNX4O95219 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNX4O95219 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
SNX4O95219 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNX4O95219 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNX4O95219 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 AC132938.6-201ENST00000623828 1655 ntBASIC16.41■□□□□ 0.22
SNX4O95219 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SNX4O95219 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
SNX4O95219 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.41■□□□□ 0.22
SNX4O95219 IGHV3-47-201ENST00000425060 335 ntBASIC16.41■□□□□ 0.22
SNX4O95219 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNX4O95219 MINOS1P3-201ENST00000457048 203 ntBASIC16.41■□□□□ 0.22
SNX4O95219 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.41■□□□□ 0.22
SNX4O95219 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX4O95219 AL121772.3-201ENST00000610840 674 ntBASIC16.41■□□□□ 0.22
SNX4O95219 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX4O95219 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 PKD1P5-201ENST00000532415 10291 ntBASIC16.41■□□□□ 0.22
SNX4O95219 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNX4O95219 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX4O95219 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 AC008894.3-201ENST00000624324 3103 ntBASIC16.41■□□□□ 0.22
SNX4O95219 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNX4O95219 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNX4O95219 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SNX4O95219 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 AL845331.1-201ENST00000424978 1190 ntBASIC16.4■□□□□ 0.22
SNX4O95219 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 AC112698.1-201ENST00000510299 916 ntBASIC16.4■□□□□ 0.22
SNX4O95219 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 KRT126P-201ENST00000549467 1181 ntBASIC16.4■□□□□ 0.22
SNX4O95219 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX4O95219 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.4■□□□□ 0.22
SNX4O95219 AL356309.3-201ENST00000624132 1934 ntBASIC16.4■□□□□ 0.22
SNX4O95219 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX4O95219 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNX4O95219 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SNX4O95219 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX4O95219 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX4O95219 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.39■□□□□ 0.22
SNX4O95219 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.39■□□□□ 0.22
SNX4O95219 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms