Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LTN1O94822 CNN2P2-201ENST00000443536 909 ntBASIC22.81■■□□□ 1.24
LTN1O94822 CNN2P3-201ENST00000450201 906 ntBASIC22.81■■□□□ 1.24
LTN1O94822 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LTN1O94822 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.81■■□□□ 1.24
LTN1O94822 FAM86C2P-203ENST00000528684 1004 ntBASIC22.81■■□□□ 1.24
LTN1O94822 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.81■■□□□ 1.24
LTN1O94822 AL136317.3-201ENST00000618497 906 ntBASIC22.81■■□□□ 1.24
LTN1O94822 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.81■■□□□ 1.24
LTN1O94822 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LTN1O94822 WASH6P-202ENST00000359512 1437 ntBASIC22.81■■□□□ 1.24
LTN1O94822 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LTN1O94822 AC004408.2-201ENST00000623613 2777 ntBASIC22.81■■□□□ 1.24
LTN1O94822 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LTN1O94822 KLF2P3-201ENST00000451977 1087 ntBASIC22.81■■□□□ 1.24
LTN1O94822 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.81■■□□□ 1.24
LTN1O94822 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.81■■□□□ 1.24
LTN1O94822 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.81■■□□□ 1.24
LTN1O94822 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.81■■□□□ 1.24
LTN1O94822 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
LTN1O94822 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.8■■□□□ 1.24
LTN1O94822 EGFEM1P-202ENST00000431685 1563 ntBASIC22.8■■□□□ 1.24
LTN1O94822 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.8■■□□□ 1.24
LTN1O94822 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 DUX4L27-201ENST00000554796 1261 ntBASIC22.8■■□□□ 1.24
LTN1O94822 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
LTN1O94822 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.8■■□□□ 1.24
LTN1O94822 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
LTN1O94822 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
LTN1O94822 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.8■■□□□ 1.24
LTN1O94822 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LTN1O94822 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
LTN1O94822 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.79■■□□□ 1.24
LTN1O94822 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.79■■□□□ 1.24
LTN1O94822 AL161645.1-201ENST00000622716 1255 ntBASIC22.79■■□□□ 1.24
LTN1O94822 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
LTN1O94822 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 GNAS-203ENST00000306120 1878 ntBASIC22.79■■□□□ 1.24
LTN1O94822 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
LTN1O94822 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
LTN1O94822 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC22.79■■□□□ 1.24
LTN1O94822 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LTN1O94822 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
LTN1O94822 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 AC140878.1-201ENST00000565277 250 ntBASIC22.78■■□□□ 1.24
LTN1O94822 AC138761.1-201ENST00000584393 385 ntBASIC22.78■■□□□ 1.24
LTN1O94822 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
LTN1O94822 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.78■■□□□ 1.24
LTN1O94822 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.78■■□□□ 1.24
LTN1O94822 AC012317.2-201ENST00000623305 2251 ntBASIC22.78■■□□□ 1.24
LTN1O94822 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.78■■□□□ 1.24
LTN1O94822 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.78■■□□□ 1.24
LTN1O94822 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.78■■□□□ 1.24
LTN1O94822 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.78■■□□□ 1.24
LTN1O94822 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.78■■□□□ 1.24
LTN1O94822 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.78■■□□□ 1.24
LTN1O94822 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LTN1O94822 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LTN1O94822 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.77■■□□□ 1.24
LTN1O94822 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.77■■□□□ 1.24
LTN1O94822 AC092580.3-201ENST00000430932 139 ntBASIC22.77■■□□□ 1.24
LTN1O94822 UGT1A2P-201ENST00000454886 866 ntBASIC22.77■■□□□ 1.24
LTN1O94822 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.77■■□□□ 1.24
LTN1O94822 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms