Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
USP1O94782 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP1O94782 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP1O94782 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 TSPY22P-201ENST00000427496 604 ntBASIC17.65■□□□□ 0.42
USP1O94782 AC007967.3-201ENST00000434308 558 ntBASIC17.65■□□□□ 0.42
USP1O94782 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.65■□□□□ 0.42
USP1O94782 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.65■□□□□ 0.42
USP1O94782 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.65■□□□□ 0.42
USP1O94782 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.65■□□□□ 0.42
USP1O94782 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP1O94782 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.65■□□□□ 0.42
USP1O94782 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.65■□□□□ 0.42
USP1O94782 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP1O94782 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP1O94782 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP1O94782 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP1O94782 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
USP1O94782 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP1O94782 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 MYCLP1-201ENST00000372451 1075 ntBASIC17.64■□□□□ 0.41
USP1O94782 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
USP1O94782 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 AC019129.2-201ENST00000609837 1235 ntBASIC17.64■□□□□ 0.41
USP1O94782 AL592071.1-201ENST00000611956 408 ntBASIC17.64■□□□□ 0.41
USP1O94782 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.64■□□□□ 0.41
USP1O94782 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP1O94782 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.64■□□□□ 0.41
USP1O94782 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP1O94782 AC125634.1-201ENST00000438758 1403 ntBASIC17.64■□□□□ 0.41
USP1O94782 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP1O94782 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP1O94782 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.63■□□□□ 0.41
USP1O94782 AL136038.3-201ENST00000561909 1096 ntBASIC17.63■□□□□ 0.41
USP1O94782 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 AC090616.6-201ENST00000582640 721 ntBASIC17.63■□□□□ 0.41
USP1O94782 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 AC124864.1-201ENST00000623408 392 ntBASIC17.63■□□□□ 0.41
USP1O94782 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP1O94782 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
USP1O94782 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms