Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL590627.1-203ENST00000421194 1026 ntBASIC18.08■□□□□ 0.48
MSI1O43347 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 AP000347.1-202ENST00000435868 847 ntBASIC18.08■□□□□ 0.48
MSI1O43347 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.08■□□□□ 0.48
MSI1O43347 AC092910.1-201ENST00000482027 1129 ntBASIC18.08■□□□□ 0.48
MSI1O43347 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.08■□□□□ 0.48
MSI1O43347 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 AC139887.3-201ENST00000568585 713 ntBASIC18.08■□□□□ 0.48
MSI1O43347 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.08■□□□□ 0.48
MSI1O43347 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.08■□□□□ 0.48
MSI1O43347 AC116407.3-201ENST00000623905 1129 ntBASIC18.08■□□□□ 0.48
MSI1O43347 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
MSI1O43347 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 LINC00896-202ENST00000609602 2128 ntBASIC18.08■□□□□ 0.48
MSI1O43347 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MSI1O43347 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MSI1O43347 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
MSI1O43347 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MSI1O43347 AC090340.1-201ENST00000620778 4980 ntBASIC18.07■□□□□ 0.48
MSI1O43347 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.07■□□□□ 0.48
MSI1O43347 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.07■□□□□ 0.48
MSI1O43347 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.07■□□□□ 0.48
MSI1O43347 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.07■□□□□ 0.48
MSI1O43347 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.07■□□□□ 0.48
MSI1O43347 AC093909.1-201ENST00000504731 1122 ntBASIC18.07■□□□□ 0.48
MSI1O43347 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.07■□□□□ 0.48
MSI1O43347 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MSI1O43347 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MSI1O43347 AL589182.2-201ENST00000619332 1049 ntBASIC18.07■□□□□ 0.48
MSI1O43347 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.07■□□□□ 0.48
MSI1O43347 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.07■□□□□ 0.48
MSI1O43347 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MSI1O43347 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.07■□□□□ 0.48
MSI1O43347 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MSI1O43347 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 NCF1C-201ENST00000438382 1427 ntBASIC18.06■□□□□ 0.48
MSI1O43347 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.06■□□□□ 0.48
MSI1O43347 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 IL9RP2-201ENST00000423948 1312 ntBASIC18.06■□□□□ 0.48
MSI1O43347 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 RPS2P28-201ENST00000314255 741 ntBASIC18.06■□□□□ 0.48
MSI1O43347 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.06■□□□□ 0.48
MSI1O43347 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 ELK2BP-201ENST00000415014 1224 ntBASIC18.06■□□□□ 0.48
MSI1O43347 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.06■□□□□ 0.48
MSI1O43347 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.06■□□□□ 0.48
MSI1O43347 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
MSI1O43347 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.06■□□□□ 0.48
MSI1O43347 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MSI1O43347 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 PP12613-201ENST00000424958 2230 ntBASIC18.06■□□□□ 0.48
MSI1O43347 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MSI1O43347 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
MSI1O43347 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MSI1O43347 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MSI1O43347 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
MSI1O43347 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MSI1O43347 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms