Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 AL162727.3-201ENST00000635661 2787 ntBASIC16.53■□□□□ 0.24
UPK1AO00322 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1AO00322 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1AO00322 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1AO00322 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UPK1AO00322 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UPK1AO00322 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1AO00322 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
UPK1AO00322 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.52■□□□□ 0.24
UPK1AO00322 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1AO00322 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 COX5BP2-201ENST00000392354 334 ntBASIC16.52■□□□□ 0.24
UPK1AO00322 AC005104.2-201ENST00000427818 678 ntBASIC16.52■□□□□ 0.24
UPK1AO00322 AC246785.2-201ENST00000432512 513 ntBASIC16.52■□□□□ 0.24
UPK1AO00322 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.52■□□□□ 0.24
UPK1AO00322 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.52■□□□□ 0.24
UPK1AO00322 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.52■□□□□ 0.24
UPK1AO00322 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1AO00322 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1AO00322 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1AO00322 AL138831.2-201ENST00000606564 490 ntBASIC16.52■□□□□ 0.24
UPK1AO00322 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1AO00322 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1AO00322 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1AO00322 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1AO00322 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
UPK1AO00322 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.52■□□□□ 0.23
UPK1AO00322 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
UPK1AO00322 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1AO00322 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.51■□□□□ 0.23
UPK1AO00322 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UPK1AO00322 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.51■□□□□ 0.23
UPK1AO00322 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 AC116353.5-201ENST00000638148 1699 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
UPK1AO00322 ARMC10P1-201ENST00000313754 855 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
UPK1AO00322 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 MIR1224-201ENST00000408193 85 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 AC007967.3-201ENST00000434308 558 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 AP002383.4-201ENST00000442518 975 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 AC091607.1-201ENST00000490318 1060 ntBASIC16.51■□□□□ 0.23
UPK1AO00322 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.51■□□□□ 0.23
UPK1AO00322 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.51■□□□□ 0.23
UPK1AO00322 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1AO00322 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
UPK1AO00322 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 KRT18P1-202ENST00000452408 1331 ntBASIC16.5■□□□□ 0.23
UPK1AO00322 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1AO00322 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
UPK1AO00322 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
UPK1AO00322 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1AO00322 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms