Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HACD3Q9P035 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 AC009053.2-201ENST00000563701 2365 ntBASIC17.66■□□□□ 0.42
HACD3Q9P035 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.66■□□□□ 0.42
HACD3Q9P035 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.66■□□□□ 0.42
HACD3Q9P035 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.66■□□□□ 0.42
HACD3Q9P035 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 AC019129.2-201ENST00000609837 1235 ntBASIC17.66■□□□□ 0.42
HACD3Q9P035 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.66■□□□□ 0.42
HACD3Q9P035 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HACD3Q9P035 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
HACD3Q9P035 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 AL645608.8-201ENST00000606034 2086 ntBASIC17.65■□□□□ 0.42
HACD3Q9P035 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HACD3Q9P035 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 RCN1P2-201ENST00000398357 915 ntBASIC17.65■□□□□ 0.42
HACD3Q9P035 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 KRT16P4-201ENST00000453883 522 ntBASIC17.65■□□□□ 0.42
HACD3Q9P035 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.65■□□□□ 0.42
HACD3Q9P035 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HACD3Q9P035 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
HACD3Q9P035 AC109462.3-201ENST00000573934 613 ntBASIC17.65■□□□□ 0.42
HACD3Q9P035 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HACD3Q9P035 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.65■□□□□ 0.42
HACD3Q9P035 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HACD3Q9P035 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HACD3Q9P035 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.64■□□□□ 0.42
HACD3Q9P035 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HACD3Q9P035 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HACD3Q9P035 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.64■□□□□ 0.42
HACD3Q9P035 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
HACD3Q9P035 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HACD3Q9P035 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.64■□□□□ 0.41
HACD3Q9P035 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.64■□□□□ 0.41
HACD3Q9P035 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.64■□□□□ 0.41
HACD3Q9P035 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.64■□□□□ 0.41
HACD3Q9P035 AL049757.1-201ENST00000616842 1596 ntBASIC17.64■□□□□ 0.41
HACD3Q9P035 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HACD3Q9P035 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms