Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 AC128676.1-201ENST00000454392 318 ntBASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 MIR3180-4-201ENST00000582223 153 ntBASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 AC060834.1-201ENST00000443027 2032 ntBASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 CRYGFP-201ENST00000418459 633 ntBASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 AC116562.2-201ENST00000507042 360 ntBASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 AC116407.2-201ENST00000613639 860 ntBASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SND1-IT1Q9HBX3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 AC132938.6-201ENST00000623828 1655 ntBASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 LINC02199-201ENST00000506655 2702 ntBASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
SND1-IT1Q9HBX3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AL135905.2-201ENST00000584934 1404 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms