Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 KLF4P1-201ENST00000412782 1185 ntBASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AC109462.3-201ENST00000573934 613 ntBASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 NKAPP1-205ENST00000585790 367 ntBASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AC148477.8-201ENST00000624298 468 ntBASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 AL049757.1-201ENST00000616842 1596 ntBASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 MTDHP4-201ENST00000600287 670 ntBASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 AL022326.1-202ENST00000641533 845 ntBASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP3Q9BWW4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AC003669.1-201ENST00000334569 611 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 MYCLP1-201ENST00000372451 1075 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SPDYE21P-201ENST00000413323 827 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AL020989.1-201ENST00000422979 469 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 BX005266.1-201ENST00000473402 457 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 OR7E14P-202ENST00000530490 1290 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 AC019129.2-201ENST00000609837 1235 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms