Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC092364.2-202ENST00000597012 1073 ntBASIC17.79■□□□□ 0.44
NOTCH4Q99466 AL009183.1-201ENST00000603760 355 ntBASIC17.79■□□□□ 0.44
NOTCH4Q99466 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NOTCH4Q99466 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NOTCH4Q99466 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 AKAP8P1-201ENST00000434743 1349 ntBASIC17.78■□□□□ 0.44
NOTCH4Q99466 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 AC051619.7-201ENST00000568314 623 ntBASIC17.78■□□□□ 0.44
NOTCH4Q99466 AC015911.4-201ENST00000588022 1070 ntBASIC17.78■□□□□ 0.44
NOTCH4Q99466 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
NOTCH4Q99466 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NOTCH4Q99466 HMGA1P7-201ENST00000406908 502 ntBASIC17.77■□□□□ 0.44
NOTCH4Q99466 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 AC093214.1-201ENST00000511688 1107 ntBASIC17.77■□□□□ 0.44
NOTCH4Q99466 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NOTCH4Q99466 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NOTCH4Q99466 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NOTCH4Q99466 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NOTCH4Q99466 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NOTCH4Q99466 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NOTCH4Q99466 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NOTCH4Q99466 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.77■□□□□ 0.43
NOTCH4Q99466 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NOTCH4Q99466 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.77■□□□□ 0.43
NOTCH4Q99466 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.77■□□□□ 0.43
NOTCH4Q99466 AC026120.1-201ENST00000611536 926 ntBASIC17.77■□□□□ 0.43
NOTCH4Q99466 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NOTCH4Q99466 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 AL355312.1-201ENST00000407115 2176 ntBASIC17.76■□□□□ 0.43
NOTCH4Q99466 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NOTCH4Q99466 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms