Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LINC00628-201ENST00000628516 1289 ntBASIC22.71■■□□□ 1.23
RAPGEF4Q8WZA2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAPGEF4Q8WZA2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.71■■□□□ 1.23
RAPGEF4Q8WZA2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAPGEF4Q8WZA2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RAPGEF4Q8WZA2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RAPGEF4Q8WZA2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAPGEF4Q8WZA2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 AC138028.4-201ENST00000564984 1845 ntBASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAPGEF4Q8WZA2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AL355306.1-201ENST00000415580 579 ntBASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 BCRP1-201ENST00000444246 691 ntBASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AL096865.1-201ENST00000606796 927 ntBASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 AC026120.1-201ENST00000611536 926 ntBASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.68■■□□□ 1.22
RAPGEF4Q8WZA2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AL627223.1-201ENST00000416693 442 ntBASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC093520.2-201ENST00000561830 333 ntBASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms