Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.05■□□□□ 0.32
ATL1Q8WXF7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AC096582.2-201ENST00000510860 516 ntBASIC17.05■□□□□ 0.32
ATL1Q8WXF7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AC092119.3-201ENST00000612618 583 ntBASIC17.05■□□□□ 0.32
ATL1Q8WXF7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AL049757.1-201ENST00000616842 1596 ntBASIC17.05■□□□□ 0.32
ATL1Q8WXF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATL1Q8WXF7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 BNIP3P18-201ENST00000593976 575 ntBASIC17.04■□□□□ 0.32
ATL1Q8WXF7 AC093458.2-201ENST00000623150 629 ntBASIC17.04■□□□□ 0.32
ATL1Q8WXF7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 CROCCP2-202ENST00000412962 2773 ntBASIC17.04■□□□□ 0.32
ATL1Q8WXF7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATL1Q8WXF7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 PP12613-201ENST00000424958 2230 ntBASIC17.03■□□□□ 0.32
ATL1Q8WXF7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 UPK3BP1-201ENST00000428678 509 ntBASIC17.03■□□□□ 0.32
ATL1Q8WXF7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 AC114341.1-201ENST00000618070 349 ntBASIC17.03■□□□□ 0.32
ATL1Q8WXF7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 AL353593.2-201ENST00000602529 1483 ntBASIC17.03■□□□□ 0.32
ATL1Q8WXF7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATL1Q8WXF7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms