Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 AL020989.1-201ENST00000422979 469 ntBASIC18.46■□□□□ 0.55
UBA3Q8TBC4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 AC079781.3-201ENST00000449110 356 ntBASIC18.46■□□□□ 0.55
UBA3Q8TBC4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 SART3-203ENST00000546611 1184 ntBASIC18.46■□□□□ 0.55
UBA3Q8TBC4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 LETM1P2-201ENST00000597330 2178 ntBASIC18.46■□□□□ 0.55
UBA3Q8TBC4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBA3Q8TBC4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBA3Q8TBC4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 AL356309.3-201ENST00000624132 1934 ntBASIC18.45■□□□□ 0.54
UBA3Q8TBC4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 AL121894.2-201ENST00000602977 491 ntBASIC18.45■□□□□ 0.54
UBA3Q8TBC4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
UBA3Q8TBC4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 AC004870.1-201ENST00000315132 882 ntBASIC18.44■□□□□ 0.54
UBA3Q8TBC4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
UBA3Q8TBC4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms