Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 AC016734.2-201ENST00000624325 1377 ntBASIC17.26■□□□□ 0.35
HPS6Q86YV9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HPS6Q86YV9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HPS6Q86YV9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HPS6Q86YV9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HPS6Q86YV9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 AL023284.2-201ENST00000405850 579 ntBASIC17.25■□□□□ 0.35
HPS6Q86YV9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 AC092597.1-201ENST00000487352 616 ntBASIC17.25■□□□□ 0.35
HPS6Q86YV9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 AC024243.1-201ENST00000609234 778 ntBASIC17.25■□□□□ 0.35
HPS6Q86YV9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HPS6Q86YV9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS6Q86YV9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
HPS6Q86YV9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 HLA-F-220ENST00000434407 884 ntBASIC17.24■□□□□ 0.35
HPS6Q86YV9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 LINC01711-201ENST00000598340 967 ntBASIC17.24■□□□□ 0.35
HPS6Q86YV9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 AC112497.1-201ENST00000624824 639 ntBASIC17.24■□□□□ 0.35
HPS6Q86YV9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 AC034236.2-201ENST00000606662 1610 ntBASIC17.24■□□□□ 0.35
HPS6Q86YV9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS6Q86YV9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS6Q86YV9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS6Q86YV9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS6Q86YV9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms