Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATPAF1Q5TC12 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 PCDH8P1-201ENST00000428983 2773 ntBASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATPAF1Q5TC12 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AC106886.4-201ENST00000623557 2502 ntBASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AP003733.1-201ENST00000491725 852 ntBASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 AC105020.1-201ENST00000435356 2205 ntBASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATPAF1Q5TC12 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 IGHGP-201ENST00000390555 1178 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 KRT18P35-201ENST00000510488 1269 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 FAM86EP-206ENST00000510506 987 ntBASIC15.16■□□□□ 0.02
ATPAF1Q5TC12 VENTXP5-201ENST00000523979 775 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms