Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC091812.2-201ENST00000619081 385 ntBASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SHROOM1Q2M3G4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 CNN2P11-201ENST00000429351 262 ntBASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 CXCL1P1-201ENST00000502804 216 ntBASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 SNHG9-202ENST00000564014 471 ntBASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 AC092902.6-201ENST00000641783 218 ntBASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHROOM1Q2M3G4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AC074386.1-202ENST00000463561 864 ntBASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SHROOM1Q2M3G4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 AC254562.1-201ENST00000417586 456 ntBASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 MKNK2P1-201ENST00000437526 628 ntBASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 AC087163.2-201ENST00000457299 853 ntBASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SHROOM1Q2M3G4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 FAM185BP-201ENST00000443595 716 ntBASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 AC023141.13-201ENST00000604991 943 ntBASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHROOM1Q2M3G4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms