Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN12P56749 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLDN12P56749 UNC93B2-201ENST00000285383 730 ntBASIC15.2■□□□□ 0.02
CLDN12P56749 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN12P56749 AC012618.2-201ENST00000428058 849 ntBASIC15.2■□□□□ 0.02
CLDN12P56749 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN12P56749 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN12P56749 AP000525.1-201ENST00000608286 694 ntBASIC15.2■□□□□ 0.02
CLDN12P56749 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN12P56749 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN12P56749 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN12P56749 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN12P56749 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 LINC01311-201ENST00000565162 1445 ntBASIC15.19■□□□□ 0.02
CLDN12P56749 PCDHA1-201ENST00000378133 2726 ntBASIC15.19■□□□□ 0.02
CLDN12P56749 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN12P56749 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.19■□□□□ 0.02
CLDN12P56749 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN12P56749 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 AC142381.4-202ENST00000563973 229 ntBASIC15.19■□□□□ 0.02
CLDN12P56749 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN12P56749 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
CLDN12P56749 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN12P56749 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN12P56749 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CLDN12P56749 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN12P56749 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CLDN12P56749 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN12P56749 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLDN12P56749 AC132872.4-202ENST00000622924 2756 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 INGX-201ENST00000359239 846 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms