Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL591684.3-201ENST00000605187 298 ntBASIC16.82■□□□□ 0.28
SLC6A12P48065 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 AC073592.4-201ENST00000623827 446 ntBASIC16.82■□□□□ 0.28
SLC6A12P48065 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 AC060834.1-201ENST00000443027 2032 ntBASIC16.82■□□□□ 0.28
SLC6A12P48065 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A12P48065 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A12P48065 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A12P48065 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A12P48065 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
SLC6A12P48065 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A12P48065 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A12P48065 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A12P48065 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A12P48065 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A12P48065 AL020989.1-201ENST00000422979 469 ntBASIC16.81■□□□□ 0.28
SLC6A12P48065 HCG4P8-203ENST00000443049 980 ntBASIC16.81■□□□□ 0.28
SLC6A12P48065 NUS1P1-201ENST00000446295 882 ntBASIC16.81■□□□□ 0.28
SLC6A12P48065 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A12P48065 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC6A12P48065 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A12P48065 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A12P48065 EGFEM1P-202ENST00000431685 1563 ntBASIC16.81■□□□□ 0.28
SLC6A12P48065 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 HTR7P1-202ENST00000624664 4411 ntBASIC16.8■□□□□ 0.28
SLC6A12P48065 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 AD000864.1-201ENST00000624076 2295 ntBASIC16.8■□□□□ 0.28
SLC6A12P48065 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 PCDHA12-202ENST00000613593 2588 ntBASIC16.8■□□□□ 0.28
SLC6A12P48065 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A12P48065 FOSL1P1-201ENST00000511041 816 ntBASIC16.8■□□□□ 0.28
SLC6A12P48065 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC6A12P48065 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC6A12P48065 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC6A12P48065 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A12P48065 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A12P48065 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A12P48065 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SLC6A12P48065 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A12P48065 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A12P48065 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A12P48065 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A12P48065 AC079776.2-201ENST00000641154 1609 ntBASIC16.79■□□□□ 0.28
SLC6A12P48065 AC092053.1-201ENST00000605787 1936 ntBASIC16.79■□□□□ 0.28
SLC6A12P48065 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A12P48065 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A12P48065 SIGLEC30P-201ENST00000455569 941 ntBASIC16.79■□□□□ 0.28
SLC6A12P48065 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A12P48065 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 AP001269.4-201ENST00000609611 512 ntBASIC16.79■□□□□ 0.28
SLC6A12P48065 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms