Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
USP8P40818 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.04■□□□□ 0.64
USP8P40818 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
USP8P40818 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
USP8P40818 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.04■□□□□ 0.64
USP8P40818 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP8P40818 AC005332.1-201ENST00000577698 1310 ntBASIC19.03■□□□□ 0.64
USP8P40818 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.03■□□□□ 0.64
USP8P40818 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.03■□□□□ 0.64
USP8P40818 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.03■□□□□ 0.64
USP8P40818 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.03■□□□□ 0.64
USP8P40818 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
USP8P40818 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.03■□□□□ 0.64
USP8P40818 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.03■□□□□ 0.64
USP8P40818 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.03■□□□□ 0.64
USP8P40818 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.03■□□□□ 0.64
USP8P40818 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
USP8P40818 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.03■□□□□ 0.64
USP8P40818 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.03■□□□□ 0.64
USP8P40818 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
USP8P40818 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP8P40818 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.02■□□□□ 0.64
USP8P40818 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP8P40818 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.02■□□□□ 0.64
USP8P40818 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.02■□□□□ 0.64
USP8P40818 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.02■□□□□ 0.64
USP8P40818 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP8P40818 FAM86EP-206ENST00000510506 987 ntBASIC19.02■□□□□ 0.64
USP8P40818 AL592071.1-201ENST00000611956 408 ntBASIC19.02■□□□□ 0.64
USP8P40818 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.02■□□□□ 0.64
USP8P40818 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 HLA-J-201ENST00000462773 1622 ntBASIC19.02■□□□□ 0.64
USP8P40818 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP8P40818 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP8P40818 AC008894.3-201ENST00000624324 3103 ntBASIC19.02■□□□□ 0.63
USP8P40818 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.02■□□□□ 0.63
USP8P40818 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP8P40818 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP8P40818 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP8P40818 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.02■□□□□ 0.63
USP8P40818 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.02■□□□□ 0.63
USP8P40818 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP8P40818 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
USP8P40818 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
USP8P40818 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.01■□□□□ 0.63
USP8P40818 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.01■□□□□ 0.63
USP8P40818 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP8P40818 BX276092.7-203ENST00000637198 1536 ntBASIC19.01■□□□□ 0.63
USP8P40818 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.01■□□□□ 0.63
USP8P40818 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.01■□□□□ 0.63
USP8P40818 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP8P40818 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms