Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 AC006504.4-201ENST00000592118 1568 ntBASIC13.64□□□□□ -0.23
CD28P10747 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 AC003669.1-201ENST00000334569 611 ntBASIC13.64□□□□□ -0.23
CD28P10747 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 YBX2P1-201ENST00000394192 760 ntBASIC13.64□□□□□ -0.23
CD28P10747 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.64□□□□□ -0.23
CD28P10747 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 ELK2BP-201ENST00000415014 1224 ntBASIC13.64□□□□□ -0.23
CD28P10747 SIGLEC30P-201ENST00000455569 941 ntBASIC13.64□□□□□ -0.23
CD28P10747 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.64□□□□□ -0.23
CD28P10747 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CD28P10747 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.64□□□□□ -0.23
CD28P10747 MIR3687-2-201ENST00000577708 61 ntBASIC13.64□□□□□ -0.23
CD28P10747 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.64□□□□□ -0.23
CD28P10747 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 AC064836.3-201ENST00000607928 673 ntBASIC13.64□□□□□ -0.23
CD28P10747 AC019129.2-201ENST00000609837 1235 ntBASIC13.64□□□□□ -0.23
CD28P10747 MIR3687-1-201ENST00000614492 61 ntBASIC13.64□□□□□ -0.23
CD28P10747 AC004706.3-202ENST00000621574 984 ntBASIC13.64□□□□□ -0.23
CD28P10747 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.64□□□□□ -0.23
CD28P10747 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD28P10747 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD28P10747 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD28P10747 RPSAP43-201ENST00000402237 625 ntBASIC13.63□□□□□ -0.23
CD28P10747 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD28P10747 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 GPX1P2-201ENST00000429271 606 ntBASIC13.63□□□□□ -0.23
CD28P10747 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.63□□□□□ -0.23
CD28P10747 AC092183.1-201ENST00000469884 875 ntBASIC13.63□□□□□ -0.23
CD28P10747 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CD28P10747 AC112482.1-201ENST00000492080 688 ntBASIC13.63□□□□□ -0.23
CD28P10747 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.63□□□□□ -0.23
CD28P10747 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CD28P10747 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD28P10747 BX276092.7-203ENST00000637198 1536 ntBASIC13.63□□□□□ -0.23
CD28P10747 NCF1C-201ENST00000438382 1427 ntBASIC13.63□□□□□ -0.23
CD28P10747 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.63□□□□□ -0.23
CD28P10747 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD28P10747 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 AC104581.1-202ENST00000635932 2618 ntBASIC13.62□□□□□ -0.23
CD28P10747 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms