Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC024563.2-201ENST00000603282 481 ntBASIC15.21■□□□□ 0.03
SFTPBP07988 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.21■□□□□ 0.03
SFTPBP07988 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SFTPBP07988 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.21■□□□□ 0.03
SFTPBP07988 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SFTPBP07988 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SFTPBP07988 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SFTPBP07988 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.21■□□□□ 0.02
SFTPBP07988 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SFTPBP07988 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SFTPBP07988 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SFTPBP07988 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SFTPBP07988 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.2■□□□□ 0.02
SFTPBP07988 HBZP1-201ENST00000354915 429 ntBASIC15.2■□□□□ 0.02
SFTPBP07988 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 SPDYE13P-201ENST00000445314 798 ntBASIC15.2■□□□□ 0.02
SFTPBP07988 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.2■□□□□ 0.02
SFTPBP07988 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.2■□□□□ 0.02
SFTPBP07988 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.2■□□□□ 0.02
SFTPBP07988 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 AL391807.1-203ENST00000604392 2365 ntBASIC15.2■□□□□ 0.02
SFTPBP07988 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SFTPBP07988 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.2■□□□□ 0.02
SFTPBP07988 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 AC009949.1-201ENST00000623048 1830 ntBASIC15.2■□□□□ 0.02
SFTPBP07988 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SFTPBP07988 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 AC133963.1-201ENST00000504166 1679 ntBASIC15.19■□□□□ 0.02
SFTPBP07988 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.19■□□□□ 0.02
SFTPBP07988 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SFTPBP07988 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SFTPBP07988 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SFTPBP07988 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.19■□□□□ 0.02
SFTPBP07988 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.19■□□□□ 0.02
SFTPBP07988 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.19■□□□□ 0.02
SFTPBP07988 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.19■□□□□ 0.02
SFTPBP07988 AL136038.4-201ENST00000603606 1261 ntBASIC15.19■□□□□ 0.02
SFTPBP07988 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 KRT89P-201ENST00000620027 1478 ntBASIC15.19■□□□□ 0.02
SFTPBP07988 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SFTPBP07988 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.19■□□□□ 0.02
SFTPBP07988 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms