Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 PCDHB18P-201ENST00000524813 2368 ntBASIC17.66■□□□□ 0.42
KDELR3O43731 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KDELR3O43731 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.66■□□□□ 0.42
KDELR3O43731 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.66■□□□□ 0.42
KDELR3O43731 AC093909.1-201ENST00000504731 1122 ntBASIC17.66■□□□□ 0.42
KDELR3O43731 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.66■□□□□ 0.42
KDELR3O43731 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.66■□□□□ 0.42
KDELR3O43731 AC012640.2-201ENST00000561606 901 ntBASIC17.66■□□□□ 0.42
KDELR3O43731 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 AL049840.3-201ENST00000602669 611 ntBASIC17.66■□□□□ 0.42
KDELR3O43731 AL139424.1-201ENST00000607572 797 ntBASIC17.66■□□□□ 0.42
KDELR3O43731 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.66■□□□□ 0.42
KDELR3O43731 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.66■□□□□ 0.42
KDELR3O43731 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.66■□□□□ 0.42
KDELR3O43731 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.66■□□□□ 0.42
KDELR3O43731 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KDELR3O43731 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.66■□□□□ 0.42
KDELR3O43731 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KDELR3O43731 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KDELR3O43731 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
KDELR3O43731 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.65■□□□□ 0.42
KDELR3O43731 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
KDELR3O43731 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 KRT18P27-201ENST00000427733 1299 ntBASIC17.65■□□□□ 0.42
KDELR3O43731 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
KDELR3O43731 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.65■□□□□ 0.42
KDELR3O43731 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.65■□□□□ 0.42
KDELR3O43731 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.65■□□□□ 0.42
KDELR3O43731 AC105339.3-201ENST00000560043 636 ntBASIC17.65■□□□□ 0.42
KDELR3O43731 MIR7706-201ENST00000613747 67 ntBASIC17.65■□□□□ 0.42
KDELR3O43731 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.65■□□□□ 0.42
KDELR3O43731 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.65■□□□□ 0.42
KDELR3O43731 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KDELR3O43731 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KDELR3O43731 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDELR3O43731 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KDELR3O43731 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KDELR3O43731 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
KDELR3O43731 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KDELR3O43731 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KDELR3O43731 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
KDELR3O43731 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.64■□□□□ 0.41
KDELR3O43731 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.64■□□□□ 0.41
KDELR3O43731 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 CROCCP2-202ENST00000412962 2773 ntBASIC17.64■□□□□ 0.41
KDELR3O43731 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KDELR3O43731 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KDELR3O43731 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDELR3O43731 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms