Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 SPDYE10P-202ENST00000612005 668 ntBASIC15.29■□□□□ 0.04
CCL21O00585 ACTL9-202ENST00000612068 1252 ntBASIC15.29■□□□□ 0.04
CCL21O00585 SPDYE8P-202ENST00000612377 668 ntBASIC15.29■□□□□ 0.04
CCL21O00585 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL21O00585 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CCL21O00585 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL21O00585 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL21O00585 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL21O00585 AL020996.1-203ENST00000536896 2307 ntBASIC15.29■□□□□ 0.04
CCL21O00585 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CCL21O00585 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL21O00585 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL21O00585 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCL21O00585 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCL21O00585 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 AC129492.6-201ENST00000611383 1305 ntBASIC15.28■□□□□ 0.04
CCL21O00585 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL21O00585 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CCL21O00585 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCL21O00585 AL627223.1-201ENST00000416693 442 ntBASIC15.28■□□□□ 0.04
CCL21O00585 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL21O00585 AC093214.1-201ENST00000511688 1107 ntBASIC15.28■□□□□ 0.04
CCL21O00585 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL21O00585 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
CCL21O00585 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL21O00585 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL21O00585 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCL21O00585 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCL21O00585 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCL21O00585 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL21O00585 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCL21O00585 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL21O00585 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.27■□□□□ 0.04
CCL21O00585 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL21O00585 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.27■□□□□ 0.04
CCL21O00585 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL21O00585 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.27■□□□□ 0.04
CCL21O00585 AC093520.2-201ENST00000561830 333 ntBASIC15.27■□□□□ 0.04
CCL21O00585 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.27■□□□□ 0.04
CCL21O00585 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.27■□□□□ 0.04
CCL21O00585 REXO1L9P-201ENST00000604264 2108 ntBASIC15.27■□□□□ 0.04
CCL21O00585 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 AC009093.7-201ENST00000623853 1223 ntBASIC15.27■□□□□ 0.04
CCL21O00585 Z92544.3-201ENST00000624747 417 ntBASIC15.27■□□□□ 0.04
CCL21O00585 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.27■□□□□ 0.04
CCL21O00585 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL21O00585 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
CCL21O00585 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL21O00585 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL21O00585 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms