Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB1Q9Y5F3 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 AC092183.1-201ENST00000469884 875 ntBASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 RPL13AP23-201ENST00000480739 586 ntBASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 AC009533.2-201ENST00000543664 586 ntBASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB1Q9Y5F3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 RCN1P2-201ENST00000398357 915 ntBASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 BX842568.4-201ENST00000421222 227 ntBASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 AC122714.2-201ENST00000502787 707 ntBASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 AC073648.2-201ENST00000510116 352 ntBASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 AC139887.3-201ENST00000568585 713 ntBASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB1Q9Y5F3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB1Q9Y5F3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms