Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 RPS2P1-201ENST00000434010 821 ntBASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 AC116407.2-201ENST00000613639 860 ntBASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 IL9RP2-201ENST00000423948 1312 ntBASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 AC138028.4-201ENST00000564984 1845 ntBASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CLIP2Q9UDT6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLIP2Q9UDT6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLIP2Q9UDT6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.7■□□□□ 0.9
CLIP2Q9UDT6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 SLC25A6P5-201ENST00000435663 894 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 BX005266.1-201ENST00000473402 457 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AC093909.1-201ENST00000504731 1122 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 MTDHP4-201ENST00000600287 670 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AC025062.2-201ENST00000605477 670 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 MIR7706-201ENST00000613747 67 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AL139288.1-201ENST00000623748 933 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AC004817.3-201ENST00000602957 2129 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 AC243591.1-201ENST00000452967 1364 ntBASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLIP2Q9UDT6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 AL049757.1-201ENST00000616842 1596 ntBASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 AC079776.2-201ENST00000641154 1609 ntBASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms