Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS2Q99743 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS2Q99743 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAS2Q99743 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.13■□□□□ 0.33
NPAS2Q99743 AL136038.4-201ENST00000603606 1261 ntBASIC17.13■□□□□ 0.33
NPAS2Q99743 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS2Q99743 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS2Q99743 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS2Q99743 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS2Q99743 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS2Q99743 AC105020.1-201ENST00000435356 2205 ntBASIC17.13■□□□□ 0.33
NPAS2Q99743 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS2Q99743 PCDHA14-201ENST00000506751 2298 ntBASIC17.13■□□□□ 0.33
NPAS2Q99743 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS2Q99743 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS2Q99743 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPAS2Q99743 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 REXO1L11P-201ENST00000620964 1927 ntBASIC17.12■□□□□ 0.33
NPAS2Q99743 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS2Q99743 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS2Q99743 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS2Q99743 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS2Q99743 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS2Q99743 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.12■□□□□ 0.33
NPAS2Q99743 AC069148.1-201ENST00000608741 768 ntBASIC17.12■□□□□ 0.33
NPAS2Q99743 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 PCDH8P1-201ENST00000428983 2773 ntBASIC17.12■□□□□ 0.33
NPAS2Q99743 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NPAS2Q99743 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.12■□□□□ 0.33
NPAS2Q99743 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS2Q99743 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NPAS2Q99743 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS2Q99743 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS2Q99743 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS2Q99743 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NPAS2Q99743 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS2Q99743 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
NPAS2Q99743 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS2Q99743 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS2Q99743 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 AC009949.1-201ENST00000623048 1830 ntBASIC17.1■□□□□ 0.33
NPAS2Q99743 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPAS2Q99743 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NPAS2Q99743 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPAS2Q99743 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS2Q99743 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS2Q99743 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.1■□□□□ 0.33
NPAS2Q99743 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms