Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 AC010654.1-201ENST00000615722 808 ntBASIC17.63■□□□□ 0.41
PHOX2BQ99453 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 Z98044.1-201ENST00000632503 1764 ntBASIC17.63■□□□□ 0.41
PHOX2BQ99453 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 TREML5P-201ENST00000421694 576 ntBASIC17.62■□□□□ 0.41
PHOX2BQ99453 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 AC010336.2-201ENST00000564226 506 ntBASIC17.62■□□□□ 0.41
PHOX2BQ99453 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.62■□□□□ 0.41
PHOX2BQ99453 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHOX2BQ99453 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.62■□□□□ 0.41
PHOX2BQ99453 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 KRT17P7-201ENST00000451704 1104 ntBASIC17.61■□□□□ 0.41
PHOX2BQ99453 KLF2P3-201ENST00000451977 1087 ntBASIC17.61■□□□□ 0.41
PHOX2BQ99453 GPR53P-205ENST00000457298 1084 ntBASIC17.61■□□□□ 0.41
PHOX2BQ99453 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PHOX2BQ99453 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHOX2BQ99453 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 TIMM8BP1-201ENST00000452384 211 ntBASIC17.6■□□□□ 0.41
PHOX2BQ99453 SERBP1P5-201ENST00000510079 1181 ntBASIC17.6■□□□□ 0.41
PHOX2BQ99453 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms