Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM43Q96BQ3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 GNAS-203ENST00000306120 1878 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 MRPS18AP1-201ENST00000414458 589 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 COX5BP8-201ENST00000416911 349 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 KRT8P23-201ENST00000560090 1207 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 MIR4515-201ENST00000584082 81 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 MIR6752-201ENST00000618442 71 ntBASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM43Q96BQ3 SLC25A24-204ENST00000569674 2357 ntBASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AC004890.2-204ENST00000481968 304 ntBASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AL161645.1-201ENST00000622716 1255 ntBASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM43Q96BQ3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 PIN1P1-201ENST00000412108 996 ntBASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 MIR6080-201ENST00000617359 66 ntBASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM43Q96BQ3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM43Q96BQ3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms