Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR3615-201ENST00000581999 87 ntBASIC17.5■□□□□ 0.39
TTC28Q96AY4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TTC28Q96AY4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC28Q96AY4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC28Q96AY4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AC087163.2-201ENST00000457299 853 ntBASIC17.49■□□□□ 0.39
TTC28Q96AY4 KRT8P13-201ENST00000463294 1010 ntBASIC17.49■□□□□ 0.39
TTC28Q96AY4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 HNRNPUP1-201ENST00000554987 333 ntBASIC17.49■□□□□ 0.39
TTC28Q96AY4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AC092978.1-202ENST00000637590 1327 ntBASIC17.49■□□□□ 0.39
TTC28Q96AY4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC28Q96AY4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC28Q96AY4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC28Q96AY4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC28Q96AY4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 BTNL10-201ENST00000595971 695 ntBASIC17.48■□□□□ 0.39
TTC28Q96AY4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 BOLA2P3-201ENST00000404566 256 ntBASIC17.48■□□□□ 0.39
TTC28Q96AY4 AC098850.1-201ENST00000419919 790 ntBASIC17.48■□□□□ 0.39
TTC28Q96AY4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC28Q96AY4 USP32P1-208ENST00000506594 1164 ntBASIC17.48■□□□□ 0.39
TTC28Q96AY4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 AC018529.1-201ENST00000613063 361 ntBASIC17.48■□□□□ 0.39
TTC28Q96AY4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC28Q96AY4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC28Q96AY4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC28Q96AY4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 ELK1P1-201ENST00000485699 580 ntBASIC17.47■□□□□ 0.39
TTC28Q96AY4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.47■□□□□ 0.39
TTC28Q96AY4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AP3S2-216ENST00000617003 1561 ntBASIC17.47■□□□□ 0.39
TTC28Q96AY4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AC087499.5-201ENST00000452760 1342 ntBASIC17.47■□□□□ 0.39
TTC28Q96AY4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC28Q96AY4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms