Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 MYCLP1-201ENST00000372451 1075 ntBASIC17.84■□□□□ 0.45
KDM1BQ8NB78 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 BX005266.1-201ENST00000473402 457 ntBASIC17.84■□□□□ 0.45
KDM1BQ8NB78 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 AC006557.2-201ENST00000592985 1240 ntBASIC17.84■□□□□ 0.45
KDM1BQ8NB78 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM1BQ8NB78 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
KDM1BQ8NB78 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 MIR574-201ENST00000385209 96 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 AC005104.2-201ENST00000427818 678 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 RPL13AP23-201ENST00000480739 586 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 IGHV3-52-201ENST00000519770 353 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 STK25P1-201ENST00000585406 838 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 AC117500.6-201ENST00000624871 588 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 PGM5P2-202ENST00000637225 1043 ntBASIC17.83■□□□□ 0.44
KDM1BQ8NB78 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KDM1BQ8NB78 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 ZNF259P1-201ENST00000407656 1365 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 PP12613-201ENST00000424958 2230 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 KRT18P27-201ENST00000427733 1299 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 SIGLEC30P-201ENST00000455569 941 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 SLC25A1P1-201ENST00000528351 927 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 AL671883.3-201ENST00000603274 991 ntBASIC17.82■□□□□ 0.44
KDM1BQ8NB78 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KDM1BQ8NB78 PRORSD1P-202ENST00000563365 2154 ntBASIC17.81■□□□□ 0.44
KDM1BQ8NB78 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDM1BQ8NB78 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms