Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 AC103564.2-201ENST00000432853 1299 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 AC004817.3-201ENST00000602957 2129 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 AC027601.4-201ENST00000611259 610 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 FAM197Y3-203ENST00000618346 717 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHTF2Q8N3S3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 UNC93B6-202ENST00000528242 690 ntBASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 AL353593.2-201ENST00000602529 1483 ntBASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHTF2Q8N3S3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AL049757.1-201ENST00000616842 1596 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC073621.1-201ENST00000392730 636 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 BX842568.4-201ENST00000421222 227 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC092865.5-201ENST00000545435 363 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AL356488.2-201ENST00000602755 427 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AC073592.5-201ENST00000624854 528 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 PCDHA12-202ENST00000613593 2588 ntBASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.04■□□□□ 0.48
PHTF2Q8N3S3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms