Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 MIR4453-201ENST00000584019 89 ntBASIC21.7■■□□□ 1.06
COL23A1Q86Y22 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 AL590560.3-201ENST00000623350 461 ntBASIC21.7■■□□□ 1.06
COL23A1Q86Y22 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 AC116562.4-201ENST00000641316 2276 ntBASIC21.69■■□□□ 1.06
COL23A1Q86Y22 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 AL009183.1-201ENST00000603760 355 ntBASIC21.69■■□□□ 1.06
COL23A1Q86Y22 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL23A1Q86Y22 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 MIR6799-201ENST00000620297 69 ntBASIC21.68■■□□□ 1.06
COL23A1Q86Y22 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 AC100757.3-201ENST00000622361 1406 ntBASIC21.68■■□□□ 1.06
COL23A1Q86Y22 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 AC073592.3-201ENST00000625118 1834 ntBASIC21.68■■□□□ 1.06
COL23A1Q86Y22 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL23A1Q86Y22 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 CU639417.3-201ENST00000624240 1404 ntBASIC21.67■■□□□ 1.06
COL23A1Q86Y22 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 SPTLC1P1-201ENST00000447199 261 ntBASIC21.67■■□□□ 1.06
COL23A1Q86Y22 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.67■■□□□ 1.06
COL23A1Q86Y22 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.66■■□□□ 1.06
COL23A1Q86Y22 KRT17P7-201ENST00000451704 1104 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms