Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 AC046185.3-201ENST00000623228 1824 ntBASIC20.86■□□□□ 0.93
RNF20Q5VTR2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 AC104819.1-201ENST00000504587 486 ntBASIC20.86■□□□□ 0.93
RNF20Q5VTR2 AC096582.2-201ENST00000510860 516 ntBASIC20.86■□□□□ 0.93
RNF20Q5VTR2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 STK25P1-201ENST00000585406 838 ntBASIC20.86■□□□□ 0.93
RNF20Q5VTR2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 PRORSD1P-202ENST00000563365 2154 ntBASIC20.86■□□□□ 0.93
RNF20Q5VTR2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF20Q5VTR2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 AP000867.3-201ENST00000524675 377 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 AC012615.1-201ENST00000565797 1299 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 BNIP3P18-201ENST00000593976 575 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 AC092329.2-201ENST00000598402 547 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.85■□□□□ 0.93
RNF20Q5VTR2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF20Q5VTR2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 AC116353.5-201ENST00000638148 1699 ntBASIC20.84■□□□□ 0.93
RNF20Q5VTR2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 POM121L3P-201ENST00000419331 1163 ntBASIC20.84■□□□□ 0.93
RNF20Q5VTR2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 INTS4P1-201ENST00000438455 1935 ntBASIC20.84■□□□□ 0.93
RNF20Q5VTR2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RNF20Q5VTR2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms