Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 AL355312.1-201ENST00000407115 2176 ntBASIC16.41■□□□□ 0.22
SMSP52788 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SMSP52788 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SMSP52788 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMSP52788 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
SMSP52788 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.41■□□□□ 0.22
SMSP52788 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
SMSP52788 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.41■□□□□ 0.22
SMSP52788 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.41■□□□□ 0.22
SMSP52788 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMSP52788 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMSP52788 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.4■□□□□ 0.22
SMSP52788 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMSP52788 KRT16P4-201ENST00000453883 522 ntBASIC16.4■□□□□ 0.22
SMSP52788 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 AC117500.6-201ENST00000624871 588 ntBASIC16.4■□□□□ 0.22
SMSP52788 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.4■□□□□ 0.22
SMSP52788 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
SMSP52788 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMSP52788 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
SMSP52788 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMSP52788 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 AL138688.1-201ENST00000624851 1594 ntBASIC16.39■□□□□ 0.21
SMSP52788 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SMSP52788 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMSP52788 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.39■□□□□ 0.21
SMSP52788 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.39■□□□□ 0.21
SMSP52788 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.39■□□□□ 0.21
SMSP52788 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.39■□□□□ 0.21
SMSP52788 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.39■□□□□ 0.21
SMSP52788 AC024563.2-201ENST00000603282 481 ntBASIC16.39■□□□□ 0.21
SMSP52788 AC124864.1-201ENST00000623408 392 ntBASIC16.39■□□□□ 0.21
SMSP52788 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SMSP52788 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.39■□□□□ 0.21
SMSP52788 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMSP52788 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMSP52788 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 AC133963.1-201ENST00000504166 1679 ntBASIC16.38■□□□□ 0.21
SMSP52788 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SMSP52788 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.38■□□□□ 0.21
SMSP52788 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.38■□□□□ 0.21
SMSP52788 SAPCD2P3-201ENST00000455031 850 ntBASIC16.38■□□□□ 0.21
SMSP52788 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 DUTP2-201ENST00000519164 463 ntBASIC16.38■□□□□ 0.21
SMSP52788 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMSP52788 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.38■□□□□ 0.21
SMSP52788 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.38■□□□□ 0.21
SMSP52788 AC120114.3-201ENST00000611923 658 ntBASIC16.38■□□□□ 0.21
SMSP52788 AL592071.1-201ENST00000611956 408 ntBASIC16.38■□□□□ 0.21
SMSP52788 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms