Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC1P51610 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HCFC1P51610 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.16■□□□□ 0.02
HCFC1P51610 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 KRT18P32-201ENST00000424695 1287 ntBASIC15.16■□□□□ 0.02
HCFC1P51610 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.16■□□□□ 0.02
HCFC1P51610 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.15■□□□□ 0.02
HCFC1P51610 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.15■□□□□ 0.02
HCFC1P51610 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 AL513480.1-201ENST00000451731 511 ntBASIC15.15■□□□□ 0.02
HCFC1P51610 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 AC096734.2-201ENST00000562054 433 ntBASIC15.15■□□□□ 0.02
HCFC1P51610 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 AL353135.1-201ENST00000606729 504 ntBASIC15.15■□□□□ 0.02
HCFC1P51610 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HCFC1P51610 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 AC025580.3-201ENST00000617932 1424 ntBASIC15.15■□□□□ 0.02
HCFC1P51610 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.15■□□□□ 0.02
HCFC1P51610 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.15■□□□□ 0.02
HCFC1P51610 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HCFC1P51610 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.02
HCFC1P51610 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
HCFC1P51610 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.14■□□□□ 0.01
HCFC1P51610 AC004449.1-201ENST00000564240 433 ntBASIC15.14■□□□□ 0.01
HCFC1P51610 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.14■□□□□ 0.01
HCFC1P51610 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.14■□□□□ 0.01
HCFC1P51610 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
HCFC1P51610 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.14■□□□□ 0.01
HCFC1P51610 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
HCFC1P51610 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCFC1P51610 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms