Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC30.64■■■□□ 2.5
SMARCA2P51531 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.49
SMARCA2P51531 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
SMARCA2P51531 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA2P51531 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC30.63■■■□□ 2.49
SMARCA2P51531 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA2P51531 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC30.63■■■□□ 2.49
SMARCA2P51531 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC30.63■■■□□ 2.49
SMARCA2P51531 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
SMARCA2P51531 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA2P51531 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA2P51531 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA2P51531 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC30.63■■■□□ 2.49
SMARCA2P51531 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC30.63■■■□□ 2.49
SMARCA2P51531 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA2P51531 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC30.62■■■□□ 2.49
SMARCA2P51531 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC30.62■■■□□ 2.49
SMARCA2P51531 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC30.62■■■□□ 2.49
SMARCA2P51531 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC30.62■■■□□ 2.49
SMARCA2P51531 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC30.62■■■□□ 2.49
SMARCA2P51531 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA2P51531 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA2P51531 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA2P51531 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC30.62■■■□□ 2.49
SMARCA2P51531 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SMARCA2P51531 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
SMARCA2P51531 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA2P51531 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA2P51531 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA2P51531 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC30.61■■■□□ 2.49
SMARCA2P51531 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC30.61■■■□□ 2.49
SMARCA2P51531 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 AC010336.2-201ENST00000564226 506 ntBASIC30.61■■■□□ 2.49
SMARCA2P51531 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC30.61■■■□□ 2.49
SMARCA2P51531 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC30.61■■■□□ 2.49
SMARCA2P51531 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC30.61■■■□□ 2.49
SMARCA2P51531 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCA2P51531 AL020996.1-203ENST00000536896 2307 ntBASIC30.6■■■□□ 2.49
SMARCA2P51531 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
SMARCA2P51531 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 LY6E-204ENST00000519546 971 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA2P51531 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC30.6■■■□□ 2.49
SMARCA2P51531 AL590560.3-201ENST00000623350 461 ntBASIC30.6■■■□□ 2.49
SMARCA2P51531 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCA2P51531 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC30.6■■■□□ 2.49
SMARCA2P51531 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SMARCA2P51531 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA2P51531 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA2P51531 MIR346-201ENST00000362234 95 ntBASIC30.59■■■□□ 2.49
SMARCA2P51531 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC30.59■■■□□ 2.49
SMARCA2P51531 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA2P51531 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC30.59■■■□□ 2.49
SMARCA2P51531 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA2P51531 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA2P51531 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SMARCA2P51531 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCA2P51531 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCA2P51531 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC30.58■■■□□ 2.49
SMARCA2P51531 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC30.58■■■□□ 2.49
SMARCA2P51531 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
SMARCA2P51531 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SMARCA2P51531 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SMARCA2P51531 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SMARCA2P51531 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCA2P51531 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA2P51531 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCA2P51531 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
SMARCA2P51531 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms